Protinfo

The goal of this website is to provide information about proteins. It is dedicated to the application of methodologies developed by our group on proteins that are of particular interest to the scientific community. Thus this serves as a complement to our Bioverse database and webserver and other resources available as a result of our computational biology activities (see credits).


Structure prediction servers

Protinfo AB CM protein tertiary structure using de novo and template modelling methods
Protinfo NMR protein tertiary structure using NMR chemical shift and NOESY data coupled with de novo simulation
PsiCSI protein secondary structure using NMR chemical shift data and neural networks

Function prediction servers

MFS protein meta-functional signature indicating functional importance of each residue
SOAK protein ion binding sites, types, affinities, and specificities from structure
PIRSpred protein inhibitor resistance/susceptibility prediction
FSSA protein functional signatures from structural alignments

Related resources

Decoys 'R' Us a database of incorrect protein conformations
Prostring convert an arbitrary string using the amino acid alphabet

Protinfo || Bioverse || Samudrala Computational Biology Research Group || protinfo@compbio.washington.edu